Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5544

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5543: 13911 - K15190 MEPCE, BCDIN3 7SK snRNA methylphosphate capping enzyme, at 338637 to 339590 13911 mRNA_5544: 13912 - Hypothetical Protein, at 340231 to 341133 13912

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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339,629 - 0.5
339,636 - -0.8
339,650 + -0.8
339,677 + 0.9
339,765 - -1.4
339,786 + 0.1
339,796 - -0.9
339,802 + -1.7
339,806 + -0.9
339,815 + -0.2
339,871 - -0.3
339,878 + 1.0
339,897 + 0.2
339,963 - 3.4
339,975 + 0.6
339,986 + -0.1
340,003 + -2.1
340,003 - 1.4
340,084 - 1.8
340,125 - -1.8
340,233 + 1.1
340,234 - 1.5
340,236 + 1.1
340,243 - -0.3
340,380 + 13912 mRNA_5544 0.17 0.9
340,528 + 13912 mRNA_5544 0.33 2.6
340,551 + 13912 mRNA_5544 0.35 0.0
340,774 + 13912 mRNA_5544 0.60 0.4
340,814 - 13912 mRNA_5544 0.65 -0.2
340,964 - 13912 mRNA_5544 0.81 -0.8
341,146 + -0.7
341,250 - 1.6
341,264 - 0.5
341,284 + 0.3
341,549 - -0.1
341,616 - 0.5
341,642 - 2.5
341,697 + 0.1
341,698 - -0.5
341,724 + 0.5
341,732 - -1.1
341,742 + -0.8
341,856 + -0.7
341,859 + -0.6
342,057 - -0.8
342,087 - 2.1