Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5539

Experiments: 40 hrs Median Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5538: 13906 - Hypothetical Protein, at 327452 to 328556 13906 mRNA_5539: 13907 - HMMPfam-NmrA-like family-PF05368,SUPERFAMILY--SSF51735, at 328856 to 330220 13907 mRNA_5540: 13908 - Interpro GDP-fucose protein O-fucosyltransferase, at 330944 to 333027 13908

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
remove
327,904 - 13906 mRNA_5538 0.41 -0.0
327,938 - 13906 mRNA_5538 0.44 -0.5
327,961 + 13906 mRNA_5538 0.46 1.8
327,963 - 13906 mRNA_5538 0.46 -0.0
328,079 - 13906 mRNA_5538 0.57 0.5
328,079 - 13906 mRNA_5538 0.57 -0.2
328,138 - 13906 mRNA_5538 0.62 0.7
328,245 + 13906 mRNA_5538 0.72 0.6
328,251 + 13906 mRNA_5538 0.72 0.6
328,270 - 13906 mRNA_5538 0.74 1.6
328,524 - 0.5
328,535 + -0.3
328,537 + 1.1
328,540 - -0.2
328,546 - 1.7
328,690 + 1.0
329,242 + 13907 mRNA_5539 0.28 1.9
329,267 - 13907 mRNA_5539 0.30 0.2
329,597 - 13907 mRNA_5539 0.54 0.3
329,604 - 13907 mRNA_5539 0.55 -0.6
329,708 - 13907 mRNA_5539 0.62 -0.5
329,859 + 13907 mRNA_5539 0.73 -1.0
329,996 + 13907 mRNA_5539 0.84 -0.8
330,435 + -0.5
330,445 - 0.2
330,574 - -0.2
330,579 - 0.9
330,580 + -0.4
330,589 - 2.0
330,728 + 0.3
330,737 - -0.0
330,753 + 0.4
330,753 + 0.8
330,761 + 0.1
330,861 - -1.5
330,870 - 0.9
330,897 - 1.2
331,024 - 0.4