Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5529

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5528: 13896 - HMMPfam-Protein of unknown function (DUF2416)-PF10315, at 305773 to 306425 13896 mRNA_5529: 13897 - K18045 SIW14, OCA3 tyrosine-protein phosphatase SIW14, at 306670 to 307631 13897

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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305,722 - -0.3
305,837 - -0.1
306,006 - 13896 mRNA_5528 0.36 1.4
306,125 - 13896 mRNA_5528 0.54 0.4
306,134 - 13896 mRNA_5528 0.55 -0.9
306,170 + 13896 mRNA_5528 0.61 0.3
306,292 - 13896 mRNA_5528 0.79 -0.1
306,315 + 13896 mRNA_5528 0.83 0.5
306,341 - 13896 mRNA_5528 0.87 -0.7
306,432 - 1.7
306,440 + -0.6
306,446 - -0.8
306,452 - 0.5
306,761 + 2.0
306,863 + 13897 mRNA_5529 0.20 0.1
307,175 + 13897 mRNA_5529 0.52 1.9
307,183 + 13897 mRNA_5529 0.53 0.0
307,354 - 13897 mRNA_5529 0.71 1.2
307,663 + 0.3
307,674 + -0.5
307,768 + -0.5
307,789 - 1.9
307,811 + 0.2
307,907 + 0.2
307,923 + -0.9
308,040 - -0.1
308,075 - 0.7
308,086 + 0.0
308,092 - 0.1
308,095 - 0.2
308,098 + 2.6
308,108 - 0.2
308,218 - 0.3
308,235 - 0.0
308,239 + 3.2
308,420 + 0.3
308,513 - 0.9
308,521 + 1.3
308,524 + 0.3
308,525 - 0.3
308,534 - 0.5
308,543 - -0.7
308,543 + 0.7
308,554 + 0.6