Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5480

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5480: 13848 - Hypothetical Protein, at 198378 to 198864 13848 mRNA_5481: 13849 - KOG2710 Rho GTPase-activating protein, at 199332 to 200672 13849

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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197,634 + 1.0
197,780 - -0.0
197,909 - 0.4
197,911 + -0.1
198,057 - 0.2
198,224 - 1.6
198,358 - 1.8
198,636 + 13848 mRNA_5480 0.53 -0.5
198,651 + 13848 mRNA_5480 0.56 1.2
198,698 - 13848 mRNA_5480 0.66 0.0
198,782 - 13848 mRNA_5480 0.83 1.0
198,788 - 13848 mRNA_5480 0.84 -0.1
198,797 - 13848 mRNA_5480 0.86 1.2
198,811 - 13848 mRNA_5480 0.89 -0.4
198,989 + 0.3
199,095 + -0.8
199,335 - 1.1
199,392 + -0.4
199,480 + 13849 mRNA_5481 0.11 -0.4
199,514 - 13849 mRNA_5481 0.14 -0.4
199,644 - 13849 mRNA_5481 0.23 0.7
199,684 - 13849 mRNA_5481 0.26 -0.3
199,812 + 13849 mRNA_5481 0.36 0.2