Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5405

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5404: 13772 - Hypothetical Protein, at 22508 to 23850 13772 mRNA_5405: 13773 - K08869 ADCK, ABC1 aarF domain-containing kinase, at 23970 to 26723 13773 mRNA_5406: 13774 - KOG2742 Predicted oxidoreductase, at 26869 to 28382 13774

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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23,068 - 13772 mRNA_5404 0.42 -0.0
23,070 + 13772 mRNA_5404 0.42 0.1
23,070 - 13772 mRNA_5404 0.42 0.9
23,095 + 13772 mRNA_5404 0.44 0.2
23,279 + 13772 mRNA_5404 0.57 0.0
23,283 + 13772 mRNA_5404 0.58 1.3
23,330 - 13772 mRNA_5404 0.61 -0.1
23,359 - 13772 mRNA_5404 0.63 1.5
23,432 - 13772 mRNA_5404 0.69 -0.5
23,641 + 13772 mRNA_5404 0.84 0.9
23,774 - 1.7
23,900 - 0.0
23,908 - 1.3
23,929 + -0.3
23,967 + 0.3
24,070 - 2.7
24,078 - 0.9
24,081 + 1.7
24,518 + 13773 mRNA_5405 0.20 0.6
24,766 - 13773 mRNA_5405 0.29 1.4
24,827 - 13773 mRNA_5405 0.31 0.6
24,850 - 13773 mRNA_5405 0.32 1.0
25,099 - 13773 mRNA_5405 0.41 0.9
25,373 - 13773 mRNA_5405 0.51 0.4
25,645 + 13773 mRNA_5405 0.61 1.8
25,667 - 13773 mRNA_5405 0.62 0.8
25,677 + 13773 mRNA_5405 0.62 0.0
25,846 + 13773 mRNA_5405 0.68 1.4
25,991 - 13773 mRNA_5405 0.73 0.3
26,132 + 13773 mRNA_5405 0.79 0.3
26,186 + 13773 mRNA_5405 0.80 -0.2
26,685 - 0.2
26,817 + 1.2
26,857 + 0.3
26,985 - -0.8
26,990 - -0.1
27,099 - 13774 mRNA_5406 0.15 1.3
27,138 - 13774 mRNA_5406 0.18 0.7
27,140 - 13774 mRNA_5406 0.18 0.9
27,155 + 13774 mRNA_5406 0.19 1.0
27,155 + 13774 mRNA_5406 0.19 0.1
27,174 - 13774 mRNA_5406 0.20 0.4
27,213 + 13774 mRNA_5406 0.23 -0.3
27,260 + 13774 mRNA_5406 0.26 1.4
27,263 + 13774 mRNA_5406 0.26 0.7
27,529 + 13774 mRNA_5406 0.44 1.8
27,545 + 13774 mRNA_5406 0.45 1.5
27,572 + 13774 mRNA_5406 0.46 0.3
27,590 - 13774 mRNA_5406 0.48 0.0
27,698 + 13774 mRNA_5406 0.55 -0.0
27,704 - 13774 mRNA_5406 0.55 -0.5
27,705 + 13774 mRNA_5406 0.55 1.3
27,721 + 13774 mRNA_5406 0.56 2.3