Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5370

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5369: 13737 - K03627 MBF1 putative transcription factor, at 557510 to 559067 13737 mRNA_5370: 13738 - K18443 GBF1 golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1, at 559592 to 565388 13738 mRNA_5371: 13739 - K03859 PIGC, GPI2 phosphatidylinositol glycan, class C, at 565702 to 566965 13739

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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558,692 - 13737 mRNA_5369 0.76 0.1
558,850 - 13737 mRNA_5369 0.86 0.6
558,855 - 13737 mRNA_5369 0.86 -1.2
558,917 + -1.4
559,330 - 0.8
560,311 - 13738 mRNA_5370 0.12 0.6
564,355 + 13738 mRNA_5370 0.82 1.5
564,359 - 13738 mRNA_5370 0.82 1.4
564,928 - -0.1
565,396 - 2.0
565,548 - -0.0
565,551 - 1.9
565,561 - 1.3
565,562 - -0.1
565,565 + 0.1
565,566 - -0.2
565,572 + -0.3
565,721 - 1.5
565,744 - 0.9