Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5330

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5330: 13698 - BLAST ZYRO0C04598p [Zygosaccharomyces rouxii], at 471272 to 473464 13698 mRNA_5331: 13699 - SUPERFAMILY--SSF52047, at 473951 to 475290 13699

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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470,875 + -0.4
470,877 - 2.1
470,879 + 2.7
471,012 - -0.5
471,040 + -0.1
471,054 - 0.6
471,057 + -1.5
471,060 - -0.6
471,060 - -0.1
471,062 - 1.2
471,202 - 0.1
471,224 - 1.6
471,608 + 13698 mRNA_5330 0.15 -1.9
471,664 + 13698 mRNA_5330 0.18 -0.2
471,793 + 13698 mRNA_5330 0.24 -1.2
472,047 + 13698 mRNA_5330 0.35 1.4
472,234 - 13698 mRNA_5330 0.44 -0.3
472,823 + 13698 mRNA_5330 0.71 0.5
472,838 + 13698 mRNA_5330 0.71 0.0
473,156 - 13698 mRNA_5330 0.86 -0.1
473,251 - -0.2
473,302 + 2.0
473,303 - 2.1
473,576 - 2.2
473,576 - -0.1
473,576 + 0.7
473,578 - -1.4
473,580 - 0.1
473,582 - 0.2
473,585 + -2.8
473,589 - -0.1
473,601 - 0.4
473,729 + -0.2
473,859 + 1.0
473,873 + -0.3
473,887 - 1.9
474,023 - -0.4
474,303 - 13699 mRNA_5331 0.26 -0.9
474,313 + 13699 mRNA_5331 0.27 0.4
474,316 + 13699 mRNA_5331 0.27 -0.2
474,319 + 13699 mRNA_5331 0.27 -1.5
474,407 - 13699 mRNA_5331 0.34 2.3
474,460 + 13699 mRNA_5331 0.38 -0.8