Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5327

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5326: 13694 - K00020 mmsB, HIBADH 3-hydroxyisobutyrate dehydrogenase, at 461748 to 463259 13694 mRNA_5327: 13695 - Hypothetical Protein, at 463511 to 464845 13695 mRNA_5328: 13696 - HMMPfam-ATP adenylyltransferase-PF09830,SUPERFAMILY--SSF54197, at 465608 to 466886 13696

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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462,537 - 13694 mRNA_5326 0.52 1.0
462,709 + 13694 mRNA_5326 0.64 -0.2
462,803 + 13694 mRNA_5326 0.70 -0.5
462,828 + 13694 mRNA_5326 0.71 -0.3
462,853 - 13694 mRNA_5326 0.73 0.7
462,965 - 13694 mRNA_5326 0.80 0.2
462,999 + 13694 mRNA_5326 0.83 0.1
463,017 + 13694 mRNA_5326 0.84 0.1
463,094 - 13694 mRNA_5326 0.89 1.1
463,135 + -0.5
463,292 - -0.3
463,309 - -0.5
463,336 - -0.1
463,478 + 0.4
463,501 - 0.1
463,602 + 0.6
463,627 + -0.6
463,790 + 13695 mRNA_5327 0.21 0.5
464,013 + 13695 mRNA_5327 0.38 0.6
464,163 - 13695 mRNA_5327 0.49 -0.9
464,642 - 13695 mRNA_5327 0.85 0.8
464,673 - 13695 mRNA_5327 0.87 -0.1
464,954 - 0.7
464,956 + -0.4
464,969 + 0.2
464,977 - 0.4
465,122 + 0.7
465,125 + 1.7
465,129 - -1.0
465,132 + -0.6
465,252 + 0.3
465,267 + -0.9
465,281 - -1.4
465,292 - -0.2
465,300 - 0.1
465,408 - -0.7
465,417 + 0.7
465,418 + 1.9
465,451 - 2.8
465,584 + -0.4
465,590 + -0.5
465,607 + 0.2
465,619 + -1.2