Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5296

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5295: 13663 - Hypothetical Protein, at 381073 to 381951 13663 mRNA_5296: 13664 - Hypothetical Protein, at 382436 to 382844 13664 mRNA_5297: 13665 - Hypothetical Protein, at 383150 to 384089 13665

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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381,627 + 13663 mRNA_5295 0.63 -1.5
381,637 + 13663 mRNA_5295 0.64 0.3
381,659 + 13663 mRNA_5295 0.67 -0.4
381,661 - 13663 mRNA_5295 0.67 -0.6
381,781 + 13663 mRNA_5295 0.81 2.3
381,782 - 13663 mRNA_5295 0.81 0.5
381,796 - 13663 mRNA_5295 0.82 -0.7
381,809 + 13663 mRNA_5295 0.84 2.2
381,812 - 13663 mRNA_5295 0.84 0.8
381,813 - 13663 mRNA_5295 0.84 0.2
381,820 - 13663 mRNA_5295 0.85 2.4
381,880 - -0.2
381,933 - 0.6
381,944 - 0.5
381,955 - -1.8
381,956 + 1.6
381,967 - -0.3
382,042 - 2.5
382,093 + 0.5
382,097 + -0.1
382,103 + 0.9
382,106 + 0.9
382,114 + 2.2
382,205 - 1.7
382,232 + -0.5
382,255 - -0.2
382,276 - 0.9
382,281 + 0.8
382,353 - -0.6
382,354 + 0.7
382,379 + -1.0
382,386 + -0.1
382,561 + 13664 mRNA_5296 0.31 0.0
382,614 + 13664 mRNA_5296 0.44 -1.2
382,638 - 13664 mRNA_5296 0.49 -1.2
382,656 + 13664 mRNA_5296 0.54 1.3
382,747 + 13664 mRNA_5296 0.76 0.3
382,809 - -0.1
382,812 - 0.1
382,813 + -0.3
382,814 - 0.3
382,823 - 1.1
382,823 - -0.4
382,824 - 0.4
382,848 - -0.6
382,864 - 1.0
382,869 + -0.4
382,874 - 0.1
382,879 + 0.4
382,882 - 1.1
382,883 + 1.3
382,885 - 0.3
382,907 - 2.1
382,911 + -0.1
382,912 - 0.5
382,921 + 0.6
382,961 - 0.2
382,973 - 0.9
383,002 + 0.0
383,003 - 1.0
383,033 - -0.3
383,047 - -0.1
383,051 - 1.0
383,066 + -0.4
383,067 + -0.3
383,074 - 0.6
383,085 - -0.2
383,097 - -0.5
383,099 - -0.3
383,114 - 0.4
383,134 + 0.9
383,138 + -0.0
383,146 - -0.8
383,156 + 2.1
383,162 - 1.0
383,163 - 0.0
383,164 + -0.2
383,165 - 0.8
383,195 - 1.1
383,198 + 2.5
383,204 - -0.9
383,212 - 0.9
383,223 - -0.2
383,266 + 13665 mRNA_5297 0.12 -0.1
383,276 - 13665 mRNA_5297 0.13 -0.6
383,370 - 13665 mRNA_5297 0.23 0.6
383,377 - 13665 mRNA_5297 0.24 0.6
383,384 + 13665 mRNA_5297 0.25 2.1
383,416 - 13665 mRNA_5297 0.28 0.6
383,417 + 13665 mRNA_5297 0.28 -0.9
383,423 + 13665 mRNA_5297 0.29 1.9
383,430 + 13665 mRNA_5297 0.30 0.3
383,535 + 13665 mRNA_5297 0.41 0.5
383,543 - 13665 mRNA_5297 0.42 -0.6
383,707 + 13665 mRNA_5297 0.59 1.1
383,728 + 13665 mRNA_5297 0.61 -1.3
383,745 + 13665 mRNA_5297 0.63 -2.9