Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5295

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5294: 13662 - K02830 HRAD1, RAD17 cell cycle checkpoint protein, at 378624 to 380568 13662 mRNA_5295: 13663 - Hypothetical Protein, at 381073 to 381951 13663 mRNA_5296: 13664 - Hypothetical Protein, at 382436 to 382844 13664

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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380,611 - 0.4
380,644 - 0.6
380,665 + 0.7
380,668 + 1.2
380,782 - 1.0
380,929 - 0.5
380,939 - -0.6
380,949 + 0.2
380,996 - 0.1
381,182 - 13663 mRNA_5295 0.12 -2.4
381,627 + 13663 mRNA_5295 0.63 -1.5
381,637 + 13663 mRNA_5295 0.64 0.3
381,659 + 13663 mRNA_5295 0.67 -0.4
381,661 - 13663 mRNA_5295 0.67 -0.6
381,781 + 13663 mRNA_5295 0.81 2.3
381,782 - 13663 mRNA_5295 0.81 0.5
381,796 - 13663 mRNA_5295 0.82 -0.7
381,809 + 13663 mRNA_5295 0.84 2.2
381,812 - 13663 mRNA_5295 0.84 0.8
381,813 - 13663 mRNA_5295 0.84 0.2
381,820 - 13663 mRNA_5295 0.85 2.4
381,880 - -0.2
381,933 - 0.6
381,944 - 0.5
381,955 - -1.8
381,956 + 1.6
381,967 - -0.3
382,042 - 2.5
382,093 + 0.5
382,097 + -0.1
382,103 + 0.9
382,106 + 0.9
382,114 + 2.2
382,205 - 1.7
382,232 + -0.5
382,255 - -0.2
382,276 - 0.9
382,281 + 0.8
382,353 - -0.6
382,354 + 0.7
382,379 + -1.0
382,386 + -0.1
382,561 + 13664 mRNA_5296 0.31 0.0
382,614 + 13664 mRNA_5296 0.44 -1.2
382,638 - 13664 mRNA_5296 0.49 -1.2
382,656 + 13664 mRNA_5296 0.54 1.3
382,747 + 13664 mRNA_5296 0.76 0.3
382,809 - -0.1
382,812 - 0.1
382,813 + -0.3
382,814 - 0.3
382,823 - 1.1
382,823 - -0.4
382,824 - 0.4
382,848 - -0.6
382,864 - 1.0
382,869 + -0.4
382,874 - 0.1
382,879 + 0.4
382,882 - 1.1
382,883 + 1.3
382,885 - 0.3
382,907 - 2.1
382,911 + -0.1
382,912 - 0.5
382,921 + 0.6