Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5280

Experiments: 40 hrs Median Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5279: 13647 - KOG2231 Predicted E3 ubiquitin ligase, at 344945 to 347664 13647 mRNA_5280: 13648 - KOG0085 G protein subunit Galphaq/Galphay, small G protein superfamily, at 348551 to 349893 13648 mRNA_5281: 13649 - KOG0085 G protein subunit Galphaq/Galphay, small G protein superfamily, at 350665 to 352490 13649

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
remove
347,729 - 1.0
347,796 + 2.7
347,882 + -1.2
347,904 + 0.5
348,210 - -0.2
348,212 - 0.4
348,312 - 0.0
348,347 + 0.9
348,360 + 1.6
348,384 - -0.7
348,762 + 13648 mRNA_5280 0.16 -1.0
348,798 - 13648 mRNA_5280 0.18 -0.4
349,032 - 13648 mRNA_5280 0.36 1.9
349,050 + 13648 mRNA_5280 0.37 0.3
349,356 + 13648 mRNA_5280 0.60 0.0
349,657 + 13648 mRNA_5280 0.82 -1.0
349,764 + 0.5
349,799 - 0.7
349,802 - -2.7
349,802 + 0.9
349,864 + -0.5
350,002 + 0.5
350,007 + 0.9
350,079 - 0.3
350,110 + -0.7
350,118 + -0.3
350,173 - 1.7
350,177 + -1.0
350,264 - -0.3
350,269 + 1.9
350,269 - 1.7
350,275 - -0.1
350,278 + 0.1
350,283 + 1.0
350,290 - 0.1
350,302 + -0.0
350,430 - 1.2
350,474 + -0.6
350,565 - 2.3
350,647 + 0.6
350,650 - -0.2
350,651 + 1.0