Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5276

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5275: 13643 - K06688 UBE2C, UBC11 ubiquitin-conjugating enzyme E2 C, at 337519 to 338338 13643 mRNA_5276: 13644 - Hypothetical Protein, at 339259 to 340241 13644 mRNA_5277: 13645 - Hypothetical Protein, at 340398 to 341217 13645

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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338,260 + 0.4
338,265 - -0.4
338,294 - 0.0
338,391 + 1.6
338,417 + -0.2
338,552 - -0.5
338,649 + 2.4
338,693 + 2.6
338,709 + -0.4
338,733 - 1.6
338,792 + -0.8
338,795 + 0.3
338,849 + 0.1
338,853 - 0.7
338,946 - 1.4
338,987 - -0.4
338,994 + 0.4
338,998 - -0.5
339,006 + 0.1
339,276 - 0.6
339,293 - -0.3
339,855 - 13644 mRNA_5276 0.61 0.5
339,856 - 13644 mRNA_5276 0.61 -1.4
339,856 - 13644 mRNA_5276 0.61 0.3
339,861 + 13644 mRNA_5276 0.61 0.2
339,861 + 13644 mRNA_5276 0.61 -0.3
339,862 + 13644 mRNA_5276 0.61 0.1
339,864 - 13644 mRNA_5276 0.62 1.0
339,927 + 13644 mRNA_5276 0.68 1.6
340,119 + 13644 mRNA_5276 0.87 -1.7
340,313 - -0.4
340,454 + 0.9
340,479 - 0.0
340,480 - 13645 mRNA_5277 0.10 -0.6
340,564 - 13645 mRNA_5277 0.20 0.0
340,675 - 13645 mRNA_5277 0.34 -2.1
340,723 - 13645 mRNA_5277 0.40 -0.5
341,050 - 13645 mRNA_5277 0.80 0.6
341,117 + 13645 mRNA_5277 0.88 -0.1