Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5250

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5250: 13618 - SUPERFAMILY--SSF101898, at 267361 to 271776 13618 mRNA_5251: 13619 - K12867 SYF1, XAB2 pre-mRNA-splicing factor SYF1, at 271974 to 275743 13619

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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266,382 + -0.4
266,661 - 1.0
266,663 - 0.4
266,788 + 0.1
266,816 + -0.4
266,927 + 1.0
266,954 - -0.1
267,528 - 1.7
267,559 + -0.3
268,415 - 13618 mRNA_5250 0.24 0.1
268,524 - 13618 mRNA_5250 0.26 1.9
268,722 + 13618 mRNA_5250 0.31 -0.7
268,803 + 13618 mRNA_5250 0.33 0.3
269,110 - 13618 mRNA_5250 0.40 1.7
269,204 + 13618 mRNA_5250 0.42 2.2
269,206 - 13618 mRNA_5250 0.42 1.5
269,618 - 13618 mRNA_5250 0.51 2.5
269,646 - 13618 mRNA_5250 0.52 -0.3
269,651 + 13618 mRNA_5250 0.52 1.2
269,812 - 13618 mRNA_5250 0.56 2.2
270,067 + 13618 mRNA_5250 0.61 -0.1
270,439 + 13618 mRNA_5250 0.70 0.9
270,506 - 13618 mRNA_5250 0.71 0.1
270,686 - 13618 mRNA_5250 0.75 -0.2
270,956 - 13618 mRNA_5250 0.81 0.0
270,977 + 13618 mRNA_5250 0.82 -0.1
270,984 + 13618 mRNA_5250 0.82 0.2
270,984 - 13618 mRNA_5250 0.82 -0.1
271,053 - 13618 mRNA_5250 0.84 0.1
271,068 + 13618 mRNA_5250 0.84 0.3
271,239 - 13618 mRNA_5250 0.88 -0.0
271,263 - 13618 mRNA_5250 0.88 0.6
271,270 - 13618 mRNA_5250 0.89 1.3
271,284 - 13618 mRNA_5250 0.89 0.2
271,286 + 13618 mRNA_5250 0.89 -0.1
271,569 - 1.5
271,840 - -0.1
271,842 - 1.1
272,162 - 0.2
272,168 + 0.5
272,667 + 13619 mRNA_5251 0.18 0.8