Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5229

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5228: 13596 - HMMPfam-Mis6-PF07778, at 203109 to 206278 13596 mRNA_5229: 13597 - SUPERFAMILY--SSF51445, at 206396 to 208003 13597

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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205,429 + 13596 mRNA_5228 0.73 1.1
205,432 - 13596 mRNA_5228 0.73 1.4
205,515 - 13596 mRNA_5228 0.76 1.6
205,523 + 13596 mRNA_5228 0.76 0.3
205,531 + 13596 mRNA_5228 0.76 -0.8
205,782 - 13596 mRNA_5228 0.84 -1.4
205,828 - 13596 mRNA_5228 0.86 1.0
205,876 + 13596 mRNA_5228 0.87 1.0
206,078 - 1.1
206,100 + -0.1
206,135 - 0.3
206,140 + 1.8
206,250 - -0.9
206,252 - 0.4
206,414 - 1.8
206,416 - -0.5
206,716 - 13597 mRNA_5229 0.20 -0.4
206,752 + 13597 mRNA_5229 0.22 1.9
206,755 + 13597 mRNA_5229 0.22 0.1
206,833 - 13597 mRNA_5229 0.27 0.6
206,863 - 13597 mRNA_5229 0.29 -0.1
206,895 + 13597 mRNA_5229 0.31 -0.4
206,983 - 13597 mRNA_5229 0.37 -1.0
207,125 + 13597 mRNA_5229 0.45 0.6
207,167 - 13597 mRNA_5229 0.48 0.0
207,204 + 13597 mRNA_5229 0.50 0.9
207,475 - 13597 mRNA_5229 0.67 0.4
207,572 + 13597 mRNA_5229 0.73 0.8
207,575 + 13597 mRNA_5229 0.73 -3.0
207,728 + 13597 mRNA_5229 0.83 1.7
207,772 - 13597 mRNA_5229 0.86 -1.4
207,828 - 13597 mRNA_5229 0.89 -0.1
208,006 - 0.0
208,020 - -0.4
208,056 + -1.5
208,292 + 1.5
208,306 - -0.9
208,778 + -1.1
208,793 + -0.5
208,812 + 0.1
208,922 - -0.1
208,964 + -0.3