Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5215

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5214: 13582 - K03845 ALG3 alpha-1,3-mannosyltransferase, at 164395 to 166467 13582 mRNA_5215: 13583 - KOG1940 Zn-finger protein, at 166614 to 167435 13583 mRNA_5217: 13585 - Hypothetical Protein, at 167751 to 168514 13585

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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165,701 - 13582 mRNA_5214 0.63 0.2
165,858 + 13582 mRNA_5214 0.71 1.8
165,948 + 13582 mRNA_5214 0.75 -0.8
166,072 + 13582 mRNA_5214 0.81 -0.4
166,118 - 13582 mRNA_5214 0.83 0.0
166,235 + 13582 mRNA_5214 0.89 -0.2
166,253 - 13582 mRNA_5214 0.90 0.2
166,276 - 0.4
166,355 + 1.1
166,394 + -0.4
166,407 + -0.4
166,408 + 0.8
166,755 + 13583 mRNA_5215 0.17 0.6
167,243 + 13583 mRNA_5215 0.77 -0.5
167,536 - 1.1
167,984 + 13585 mRNA_5217 0.30 -1.2
168,036 + 13585 mRNA_5217 0.37 0.1
168,141 - 13585 mRNA_5217 0.51 0.1
168,170 - 13585 mRNA_5217 0.55 0.8
168,417 - 13585 mRNA_5217 0.87 0.3
168,429 - 13585 mRNA_5217 0.89 0.8