Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5178

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5177: 13545 - K07874 RAB1A Ras-related protein Rab-1A, at 81218 to 82188 13545 mRNA_5178: 13546 - BLAST chromatin remodeling factor subunit [Kalmanozyma ..., at 83184 to 83780 13546 mRNA_5179: 13547 - Hypothetical Protein, at 84295 to 87162 13547

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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82,601 - 0.0
82,862 + -0.0
82,916 + -0.1
83,186 + 0.8
83,211 + 0.1
83,476 - 13546 mRNA_5178 0.49 0.8
83,486 + 13546 mRNA_5178 0.51 -0.4
83,633 + 13546 mRNA_5178 0.75 -0.4
83,655 - 13546 mRNA_5178 0.79 -0.5
83,813 + -0.4
84,092 + 2.0
84,092 - -0.6
84,330 + 0.7
84,347 - 1.4
84,390 - -0.1
84,700 - 13547 mRNA_5179 0.14 -0.8