Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5159

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5158: 13526 - K15128 MED6 mediator of RNA polymerase II transcription subunit 6, at 39677 to 40567 13526 mRNA_5159: 13527 - Hypothetical Protein, at 41390 to 42543 13527 mRNA_5160: 13528 - Hypothetical Protein, at 43089 to 43847 13528

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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40,687 + 0.8
40,796 - 0.2
40,805 + 0.2
40,938 - -0.8
41,120 + 0.6
41,121 + -0.3
41,147 + 0.8
41,193 + 0.6
41,390 - 1.3
41,408 + 0.9
41,717 + 13527 mRNA_5159 0.28 0.8
41,812 + 13527 mRNA_5159 0.37 -1.1
41,814 - 13527 mRNA_5159 0.37 -0.1
41,975 + 13527 mRNA_5159 0.51 1.6
42,119 + 13527 mRNA_5159 0.63 2.1
42,256 + 13527 mRNA_5159 0.75 0.7
42,275 + 13527 mRNA_5159 0.77 1.1
42,286 + 13527 mRNA_5159 0.78 -0.5
42,296 + 13527 mRNA_5159 0.79 0.2
42,320 - 13527 mRNA_5159 0.81 0.3
42,555 + 0.6
42,721 - 0.7
43,332 - 13528 mRNA_5160 0.32 1.8
43,503 - 13528 mRNA_5160 0.55 0.9