Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5147

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5146: 13514 - Hypothetical Protein, at 12998 to 14215 13514 mRNA_5147: 13515 - Hypothetical Protein, at 15131 to 16351 13515

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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14,146 + -0.1
14,309 + -0.4
14,337 - -0.6
14,340 - 0.4
14,341 + 0.2
14,348 - 0.2
14,350 + -0.3
14,357 + 1.8
14,457 - -0.8
14,459 + 0.4
14,480 - 0.3
14,494 - 0.3
14,494 - 0.2
14,495 + -0.2
14,496 + -0.0
14,504 + -1.7
14,504 + 0.3
14,504 + 1.9
14,504 + 0.8
14,508 + 0.3
14,646 + 1.2
14,709 + 1.1
14,785 + 0.6
14,794 + -0.8
15,169 + -0.8
15,184 + -0.7
15,219 + 0.5
15,244 + 2.3
15,356 + 13515 mRNA_5147 0.18 -0.2
15,381 + 13515 mRNA_5147 0.20 1.8
15,386 + 13515 mRNA_5147 0.21 0.5
15,677 + 13515 mRNA_5147 0.45 0.1
15,928 - 13515 mRNA_5147 0.65 0.8
15,938 - 13515 mRNA_5147 0.66 0.3
16,093 + 13515 mRNA_5147 0.79 -0.3
16,099 + 13515 mRNA_5147 0.79 1.2
16,205 + 13515 mRNA_5147 0.88 0.5
16,231 - 0.4
16,515 - 0.2
16,520 - -0.1
16,535 + -0.0
16,621 - -0.1
16,665 + 1.0
16,687 + 0.5
16,710 + 0.1
16,716 + 0.5
16,791 + 0.0
16,949 - 0.6
16,966 - -0.8
16,973 + 0.8
16,983 + 0.2
16,985 + 2.2
16,986 + 1.1
16,988 + -0.9
16,989 - 1.6
16,992 + 0.9
16,994 - 1.0
16,997 + 0.2
17,006 + -0.0
17,026 + -0.1
17,117 - -0.1
17,123 - -0.4
17,151 + 1.0
17,284 - 1.7
17,285 + 1.5