Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5022

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5021: 13389 - K14347 SLC10A7, P7 solute carrier family 10 (sodium/bile acid cotransporter), member 7, at 1569492 to 1571260 13389 mRNA_5022: 13390 - Hypothetical Protein, at 1571502 to 1572574 13390 mRNA_5023: 13391 - K17866 DPH2 diphthamide biosynthesis protein 2, at 1572815 to 1575164 13391

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,570,694 + 13389 mRNA_5021 0.68 -0.3
1,570,969 + 13389 mRNA_5021 0.83 -0.5
1,571,140 - -0.1
1,571,746 - 13390 mRNA_5022 0.23 2.0
1,571,842 - 13390 mRNA_5022 0.32 -0.1
1,571,863 + 13390 mRNA_5022 0.34 3.9
1,571,863 + 13390 mRNA_5022 0.34 0.0
1,572,156 - 13390 mRNA_5022 0.61 2.8