Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4991

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4990: 13358 - K00354 E1.6.99.1 NADPH2 dehydrogenase, at 1486606 to 1488181 13358 mRNA_4991: 13359 - Hypothetical Protein, at 1488535 to 1491302 13359 mRNA_4992: 13360 - Hypothetical Protein, at 1492258 to 1494685 13360

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,488,017 - 13358 mRNA_4990 0.90 -0.3
1,488,133 - 0.4
1,488,136 - 0.0
1,488,136 + -0.6
1,488,138 - -0.1
1,488,178 + 0.9
1,488,296 + 0.0
1,488,305 + -1.3
1,488,323 + -0.3
1,488,327 + -0.0
1,488,333 - 1.2
1,488,372 - 1.1
1,488,428 - -0.2
1,488,433 + -0.7
1,489,206 + 13359 mRNA_4991 0.24 -0.8
1,489,469 - 13359 mRNA_4991 0.34 -2.6
1,490,041 - 13359 mRNA_4991 0.54 1.2
1,490,046 - 13359 mRNA_4991 0.55 0.4
1,490,073 - 13359 mRNA_4991 0.56 0.1
1,490,218 + 13359 mRNA_4991 0.61 1.3
1,490,346 - 13359 mRNA_4991 0.65 -0.0
1,490,385 + 13359 mRNA_4991 0.67 1.1
1,490,945 + 13359 mRNA_4991 0.87 0.5
1,491,225 - 1.8
1,491,235 + 0.1
1,491,240 - -1.2
1,491,242 - 1.2
1,491,244 - -0.6
1,491,380 + -1.0
1,491,496 + 1.2
1,491,509 - -0.3
1,491,545 - 0.7
1,491,660 - -1.1
1,491,819 + -0.2
1,491,832 + 1.0
1,491,852 + 0.8
1,491,943 + 0.7