Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4872

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4871: 13239 - K03777 dld D-lactate dehydrogenase, at 1185921 to 1188048 13239 mRNA_4872: 13240 - Hypothetical Protein, at 1188698 to 1189328 13240

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,187,762 + 13239 mRNA_4871 0.87 0.5
1,188,056 - 0.4
1,188,061 + 0.9
1,188,205 + -0.8
1,188,219 - -0.2
1,188,222 + 1.1
1,188,245 + 0.7
1,188,248 + 0.5
1,188,390 - 0.2
1,188,533 + 0.4
1,188,539 - 1.0
1,188,672 + -0.1
1,188,676 - -0.2
1,188,678 + 0.2
1,188,679 - -1.5
1,188,697 - 1.6
1,188,699 + 0.3
1,188,713 + 1.4
1,188,792 - 13240 mRNA_4872 0.15 2.5
1,188,823 + 13240 mRNA_4872 0.20 0.3
1,188,828 + 13240 mRNA_4872 0.21 -1.6
1,188,854 - 13240 mRNA_4872 0.25 1.4
1,188,970 - 13240 mRNA_4872 0.43 -1.9
1,188,997 + 13240 mRNA_4872 0.47 1.2
1,189,088 - 13240 mRNA_4872 0.62 2.1
1,189,426 + -0.3
1,189,443 - 0.7
1,189,577 - 2.2
1,189,758 + 2.0
1,189,896 + 0.3
1,189,931 - -1.1
1,189,980 - 0.0
1,190,265 - 1.5
1,190,291 - -0.9
1,190,313 + 1.4