Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4775

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4774: 13142 - K02998 RP-SAe, RPSA small subunit ribosomal protein SAe, at 987579 to 988756 13142 mRNA_4775: 13143 - K01724 PCBD, phhB 4a-hydroxytetrahydrobiopterin dehydratase, at 989386 to 989809 13143 mRNA_4776: 13144 - Hypothetical Protein, at 990713 to 991663 13144

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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988,806 - 0.4
988,996 - -1.6
989,027 + 0.6
989,029 - -0.1
989,296 - -0.5
989,591 + 13143 mRNA_4775 0.48 1.8
989,611 + 13143 mRNA_4775 0.53 -0.1
989,745 - 13143 mRNA_4775 0.85 -0.8
989,745 + 13143 mRNA_4775 0.85 1.4
989,750 - 13143 mRNA_4775 0.86 0.2
989,750 - 13143 mRNA_4775 0.86 -0.6
989,801 + 0.7
990,054 - 1.0
990,057 + 1.0
990,192 + 0.6
990,224 - -0.3
990,342 - 0.3
990,352 - -0.5
990,363 - 2.1
990,372 - 0.1
990,807 - 1.1