Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4759

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4759: 13127 - HMMPfam-Fungal cellulose binding domain-PF00734,ProSiteProfiles-CBM1 (carbohydrate binding type-1) domain profile.-PS51164,SMART-Fungal-type cellulose-binding domain-SM00236,SUPERFAMILY--SSF57180, at 940381 to 941157 13127 mRNA_4760: 13128 - K08157 TPO1 MFS transporter, DHA1 family, multidrug resistance protein, at 941332 to 944070 13128

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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939,442 + 0.0
939,484 + -1.3
939,543 + -0.4
939,543 + 0.6
939,632 + 0.3
939,839 + 0.8
939,861 + 0.4
940,107 - 1.0
940,231 - 0.7
940,237 - 0.4
940,648 + 13127 mRNA_4759 0.34 -0.7
940,692 - 13127 mRNA_4759 0.40 0.0
940,762 - 13127 mRNA_4759 0.49 1.3
940,983 - 13127 mRNA_4759 0.77 -0.2
941,157 + 1.8
941,390 - 0.9
941,391 + -0.0
941,396 + 1.2
941,609 + 13128 mRNA_4760 0.10 -0.5
941,736 + 13128 mRNA_4760 0.15 0.1
941,785 + 13128 mRNA_4760 0.17 0.1
942,025 - 13128 mRNA_4760 0.25 0.9
942,032 + 13128 mRNA_4760 0.26 0.1