Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4742

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4741: 13109 - KOG2208 Vigilin, at 896784 to 901112 13109 mRNA_4742: 13110 - SUPERFAMILY--SSF52047, at 901391 to 902457 13110

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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900,428 + 13109 mRNA_4741 0.84 0.3
900,595 - 13109 mRNA_4741 0.88 2.3
900,670 + 13109 mRNA_4741 0.90 0.2
900,834 - -0.1
900,885 - 1.0
900,892 + 1.0
900,967 - 0.2
901,042 + 1.1
901,180 + 1.7
901,282 - -0.4
901,357 + -0.1
901,862 - 13110 mRNA_4742 0.44 0.2
901,928 + 13110 mRNA_4742 0.50 1.0
901,930 - 13110 mRNA_4742 0.51 0.4
902,195 + 13110 mRNA_4742 0.75 -1.4
902,269 - 13110 mRNA_4742 0.82 -0.1
902,406 + 0.7
902,721 - 0.5
902,881 - 0.7
903,021 + 0.3
903,142 - -0.0
903,280 - -0.2
903,340 + -0.4
903,354 - -0.1
903,383 + 0.3
903,397 + -0.4
903,401 - 0.1
903,403 + 2.3