Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4721

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4720: 13088 - K01415 ECE endothelin-converting enzyme, at 851220 to 854422 13088 mRNA_4721: 13089 - K10643 CNOT4, NOT4, MOT2 CCR4-NOT transcription complex subunit 4, at 854665 to 858103 13089 mRNA_4722: 13090 - K01027 OXCT 3-oxoacid CoA-transferase, at 858449 to 860854 13090

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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853,825 + 13088 mRNA_4720 0.81 -0.8
853,869 - 13088 mRNA_4720 0.83 -0.5
854,104 + 2.7
854,122 + 0.1
854,250 + 0.4
854,365 + -1.0
854,407 - 0.8
854,410 + 0.2
854,415 - -0.3
854,420 + 0.1
854,528 + -1.1
854,587 - 2.1
854,589 - 0.3
854,593 - -0.4
854,610 + -0.1
854,664 + 0.3
854,743 + 0.4
854,753 - -0.4
854,756 + 0.4
854,884 - -2.5
856,535 + 13089 mRNA_4721 0.54 -1.7
857,781 + -1.2
858,337 + 0.3
858,513 - 1.3
858,848 + 13090 mRNA_4722 0.17 -1.6
858,979 - 13090 mRNA_4722 0.22 0.3
858,990 + 13090 mRNA_4722 0.22 -0.2
859,010 - 13090 mRNA_4722 0.23 0.8