Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4697

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4696: 13064 - KOG1756 Histone 2A, at 796428 to 796805 13064 mRNA_4697: 13065 - K05291 PIGS phosphatidylinositol glycan, class S, at 797129 to 800158 13065 mRNA_4698: 13066 - K12193 VPS24, CHMP3 charged multivesicular body protein 3, at 800404 to 801169 13066

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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796,299 - 1.2
796,383 - 1.3
796,402 - -1.0
797,567 - 13065 mRNA_4697 0.14 -0.2
798,302 - 13065 mRNA_4697 0.39 1.1
798,308 + 13065 mRNA_4697 0.39 1.6
798,325 - 13065 mRNA_4697 0.39 -0.2
798,329 + 13065 mRNA_4697 0.40 0.3
798,344 - 13065 mRNA_4697 0.40 1.1
798,350 + 13065 mRNA_4697 0.40 -0.1
798,350 + 13065 mRNA_4697 0.40 -1.8
798,461 + 13065 mRNA_4697 0.44 -0.2
798,465 + 13065 mRNA_4697 0.44 1.1
798,620 - 13065 mRNA_4697 0.49 0.0
800,224 - -0.7
800,391 + 0.3