Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4623

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4622: 12990 - K20168 TBC1D15 TBC1 domain family member 15, at 621636 to 624863 12990 mRNA_4623: 12991 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF81383, at 625237 to 628203 12991 mRNA_4624: 12992 - Hypothetical Protein, at 628501 to 629051 12992

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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625,028 + 0.9
625,155 - -0.6
625,579 + 12991 mRNA_4623 0.12 0.6
625,735 + 12991 mRNA_4623 0.17 -0.4
626,067 + 12991 mRNA_4623 0.28 1.5
626,313 + 12991 mRNA_4623 0.36 -0.3
626,515 + 12991 mRNA_4623 0.43 0.8
626,622 - 12991 mRNA_4623 0.47 0.9
627,362 + 12991 mRNA_4623 0.72 0.4
627,372 - 12991 mRNA_4623 0.72 0.5
628,098 + 1.3
628,566 + 12992 mRNA_4624 0.12 2.6
628,844 + 12992 mRNA_4624 0.62 -0.3