Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4583

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4582: 12950 - KOG2450 Aldehyde dehydrogenase, at 517111 to 519102 12950 mRNA_4583: 12951 - Hypothetical Protein, at 519562 to 522262 12951 mRNA_4584: 12952 - KOG2217 U4/U6.U5 snRNP associated protein, at 522461 to 526317 12952

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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518,789 + 12950 mRNA_4582 0.84 0.3
518,897 - 12950 mRNA_4582 0.90 -1.3
519,103 + 0.9
519,106 - 0.3
519,287 + -1.4
519,348 - -0.8
519,374 + 0.0
519,378 - 0.0
519,401 + -0.8
519,406 - -0.8
519,409 - -0.3
519,831 + -1.1
519,831 + 2.1
519,845 - 12951 mRNA_4583 0.10 1.5
519,965 - 12951 mRNA_4583 0.15 0.1
519,971 + 12951 mRNA_4583 0.15 -1.7
520,103 + 12951 mRNA_4583 0.20 0.2
520,132 + 12951 mRNA_4583 0.21 -0.4
521,001 + 12951 mRNA_4583 0.53 0.4
521,138 - 12951 mRNA_4583 0.58 -0.2
521,253 - 12951 mRNA_4583 0.63 0.2
521,579 + 12951 mRNA_4583 0.75 1.0
521,864 - 12951 mRNA_4583 0.85 2.3
523,129 + 12952 mRNA_4584 0.17 -0.0
523,207 + 12952 mRNA_4584 0.19 -0.2
523,212 - 12952 mRNA_4584 0.19 0.6