Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4538

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4537: 12905 - KOG0472 Leucine-rich repeat protein, at 406318 to 409422 12905 mRNA_4538: 12906 - KOG2112 Lysophospholipase, at 409562 to 410663 12906 mRNA_4539: 12907 - HMMPfam-DNA polymerase subunit Cdc27-PF09507, at 410744 to 412303 12907

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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408,683 + 12905 mRNA_4537 0.76 0.7
408,686 - 12905 mRNA_4537 0.76 1.5
408,879 + 12905 mRNA_4537 0.82 0.8
409,202 - 0.1
409,398 - -0.5
410,546 + 12906 mRNA_4538 0.89 1.7
410,552 + 12906 mRNA_4538 0.90 0.7
410,552 - 12906 mRNA_4538 0.90 1.8
410,713 + 1.1
410,719 - 1.5
410,723 + 1.8