Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4529

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4528: 12896 - Hypothetical Protein, at 386739 to 388320 12896 mRNA_4529: 12897 - HMMPfam-Galactose oxidase, central domain-PF13418,SUPERFAMILY--SSF117281, at 389122 to 390984 12897

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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388,235 - -0.7
388,420 + 0.4
388,449 + 1.1
388,556 - 0.9
388,561 + 0.2
388,571 + 0.8
388,571 + 0.3
388,574 - 0.0
388,590 - 0.8
388,593 - 2.0
388,732 + -0.4
389,149 + 0.3
389,179 - -0.3
389,181 + -0.1
389,625 - 12897 mRNA_4529 0.27 0.9
389,930 + 12897 mRNA_4529 0.43 1.8
389,936 + 12897 mRNA_4529 0.44 -0.5
390,179 - 12897 mRNA_4529 0.57 0.9
390,349 - 12897 mRNA_4529 0.66 0.2
391,917 + 2.3