Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4491

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4490: 12858 - KOG1208 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 304461 to 305865 12858 mRNA_4491: 12859 - Hypothetical Protein, at 306091 to 307232 12859 mRNA_4492: 12860 - KOG1198 Zinc-binding oxidoreductase, at 307905 to 309384 12860

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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305,112 + 12858 mRNA_4490 0.46 1.6
305,263 - 12858 mRNA_4490 0.57 1.1
305,325 - 12858 mRNA_4490 0.61 -0.3
305,721 + 12858 mRNA_4490 0.90 0.6
305,904 - 0.8
306,298 + 12859 mRNA_4491 0.18 1.5
306,548 - 12859 mRNA_4491 0.40 0.6
306,586 + 12859 mRNA_4491 0.43 0.2
306,765 + 12859 mRNA_4491 0.59 0.5
306,812 + 12859 mRNA_4491 0.63 0.8
307,546 - 0.6
307,687 - 0.2
307,907 + 0.4
307,918 + 1.9
307,919 + -0.1
308,052 + 0.0
308,199 - 12860 mRNA_4492 0.20 1.2
308,205 + 12860 mRNA_4492 0.20 0.3