Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4429

Experiments: 40 hrs Median Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4428: 12796 - Hypothetical Protein, at 161727 to 164031 12796 mRNA_4429: 12797 - HMMPfam-GDP-fucose protein O-fucosyltransferase-PF10250, at 164549 to 166627 12797 mRNA_4430: 12798 - KOG0322 G-protein beta subunit-like protein GNB1L, contains WD repeats, at 167017 to 168895 12798

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
remove
163,567 - 12796 mRNA_4428 0.80 0.6
163,705 - 12796 mRNA_4428 0.86 -0.2
163,858 + -0.1
163,941 - 0.9
164,189 - 1.7
164,190 + -0.1
164,367 - -1.1
164,375 + 1.1
164,375 + 1.2
164,422 - 1.9
164,650 + -1.7
164,670 + 2.0
164,881 + 12797 mRNA_4429 0.16 2.0
164,962 - 12797 mRNA_4429 0.20 0.0
165,051 + 12797 mRNA_4429 0.24 0.5
165,359 - 12797 mRNA_4429 0.39 0.2
165,474 + 12797 mRNA_4429 0.44 0.3
165,489 - 12797 mRNA_4429 0.45 1.2
165,557 + 12797 mRNA_4429 0.48 2.3
165,582 - 12797 mRNA_4429 0.50 2.3
165,659 - 12797 mRNA_4429 0.53 1.2
165,698 + 12797 mRNA_4429 0.55 -0.3
165,699 + 12797 mRNA_4429 0.55 0.7
165,702 + 12797 mRNA_4429 0.55 1.5
165,741 + 12797 mRNA_4429 0.57 -1.7
165,783 + 12797 mRNA_4429 0.59 0.7
166,071 - 12797 mRNA_4429 0.73 -0.1
166,081 + 12797 mRNA_4429 0.74 0.3
166,081 + 12797 mRNA_4429 0.74 1.2
166,174 - 12797 mRNA_4429 0.78 1.7
166,217 - 12797 mRNA_4429 0.80 0.4
166,223 - 12797 mRNA_4429 0.81 -0.1
166,225 - 12797 mRNA_4429 0.81 -0.2
166,382 + 12797 mRNA_4429 0.88 1.8
166,494 + -0.2
166,526 + 1.8
166,527 + 0.6
166,595 + -0.5
166,646 - 0.5
166,693 - 0.3
166,779 - 0.4
166,787 - 0.3
166,790 - 2.2
166,807 - -0.2
166,817 + -0.3
166,966 - 0.7