Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4360

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4359: 12727 - Hypothetical Protein, at 194 to 736 12727 mRNA_4360: 12728 - Hypothetical Protein, at 964 to 3087 12728

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1 + 2.2
34 + 0.4
36 + 0.4
40 + 2.0
106 - -0.4
115 + 0.5
156 - 0.5
162 + 0.1
170 + 0.3
318 + 12727 mRNA_4359 0.23 -0.7
397 + 12727 mRNA_4359 0.37 2.7
440 + 12727 mRNA_4359 0.45 0.5
450 + 12727 mRNA_4359 0.47 2.2
491 + 12727 mRNA_4359 0.55 0.4
494 - 12727 mRNA_4359 0.55 -0.9
500 - 12727 mRNA_4359 0.56 0.9
513 + 12727 mRNA_4359 0.59 -0.1
527 - 12727 mRNA_4359 0.61 0.7
535 + 12727 mRNA_4359 0.63 1.2
537 - 12727 mRNA_4359 0.63 0.2
573 - 12727 mRNA_4359 0.70 0.9
575 - 12727 mRNA_4359 0.70 -0.1
575 - 12727 mRNA_4359 0.70 -0.2
585 + 12727 mRNA_4359 0.72 1.7
627 - 12727 mRNA_4359 0.80 0.1
629 + 12727 mRNA_4359 0.80 -0.0
632 + 12727 mRNA_4359 0.81 1.9
655 + 12727 mRNA_4359 0.85 -0.8
657 - 12727 mRNA_4359 0.85 0.7
666 + 12727 mRNA_4359 0.87 -0.5
837 + 1.2
866 + -1.9
966 + -0.5
1,080 + -0.2
1,091 + 0.3
1,091 + 0.2
1,092 + 0.2
1,119 + 0.2
1,180 - 12728 mRNA_4360 0.10 -0.7
1,185 - 12728 mRNA_4360 0.10 -1.5
1,186 + 12728 mRNA_4360 0.10 0.4
1,262 + 12728 mRNA_4360 0.14 -0.2
1,362 + 12728 mRNA_4360 0.19 -0.3
1,365 - 12728 mRNA_4360 0.19 0.2
1,368 - 12728 mRNA_4360 0.19 -1.2
1,381 + 12728 mRNA_4360 0.20 2.1
1,539 - 12728 mRNA_4360 0.27 1.1
1,589 + 12728 mRNA_4360 0.29 1.1
1,630 + 12728 mRNA_4360 0.31 -1.3
1,688 + 12728 mRNA_4360 0.34 0.7
1,692 + 12728 mRNA_4360 0.34 0.1
1,698 - 12728 mRNA_4360 0.35 0.2
1,699 + 12728 mRNA_4360 0.35 0.5
1,763 + 12728 mRNA_4360 0.38 0.3
1,788 + 12728 mRNA_4360 0.39 2.0
1,796 + 12728 mRNA_4360 0.39 0.6
1,867 + 12728 mRNA_4360 0.43 -0.5
2,010 + 12728 mRNA_4360 0.49 0.3
2,037 + 12728 mRNA_4360 0.51 -1.0
2,077 - 12728 mRNA_4360 0.52 1.0
2,125 + 12728 mRNA_4360 0.55 2.3
2,128 - 12728 mRNA_4360 0.55 -0.1
2,222 + 12728 mRNA_4360 0.59 0.1
2,224 - 12728 mRNA_4360 0.59 -1.4
2,280 + 12728 mRNA_4360 0.62 -0.3
2,303 + 12728 mRNA_4360 0.63 2.5
2,354 + 12728 mRNA_4360 0.65 0.7
2,357 - 12728 mRNA_4360 0.66 0.2
2,378 - 12728 mRNA_4360 0.67 -0.1
2,396 + 12728 mRNA_4360 0.67 0.2
2,447 - 12728 mRNA_4360 0.70 -1.0
2,549 + 12728 mRNA_4360 0.75 -0.1
2,681 + 12728 mRNA_4360 0.81 0.1
2,991 + 0.3
3,097 - -0.9
3,106 + -1.5
3,107 + -1.4
3,152 + 1.4
3,276 + 0.5
3,398 + 0.1
3,399 + 1.2
3,417 + 0.3
3,516 + 0.3
3,568 - -0.3
3,574 - -0.5
3,578 + 0.4
3,632 + 0.0
3,691 + 0.6
3,692 - 2.3
3,695 - 0.2
3,719 - -0.2
3,759 + 0.1
3,775 + 0.4
3,843 - 0.1
3,845 - -1.0
3,845 - 0.2
3,850 + -0.4
3,852 + -0.4
3,859 + -2.0