Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4319

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4318: 12686 - HMMPfam-SnoaL-like domain-PF13577,SUPERFAMILY--SSF54427, at 1892853 to 1893990 12686 mRNA_4319: 12687 - Hypothetical Protein, at 1894697 to 1895182 12687 mRNA_4320: 12688 - K03255 TIF31, CLU1 protein TIF31, at 1895347 to 1900311 12688

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,893,769 + 12686 mRNA_4318 0.80 0.8
1,894,037 - 0.0
1,894,309 - -0.5
1,894,463 - 2.5
1,894,489 - -1.2
1,894,554 - 1.6
1,894,560 - 0.3
1,894,562 - 1.5
1,894,563 + -0.1
1,894,572 + 1.1
1,894,676 + 0.7
1,894,728 - 1.6
1,894,737 + 1.4
1,894,970 + 12687 mRNA_4319 0.56 -0.8
1,895,011 + 12687 mRNA_4319 0.65 0.2
1,895,022 - 12687 mRNA_4319 0.67 0.1
1,895,043 - 12687 mRNA_4319 0.71 0.1
1,895,045 + 12687 mRNA_4319 0.72 0.3
1,895,297 - -1.0
1,895,359 + -1.0
1,895,582 + -0.7
1,896,037 - 12688 mRNA_4320 0.14 -0.4
1,896,070 + 12688 mRNA_4320 0.15 -0.2