Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4291

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4290: 12658 - Hypothetical Protein, at 1814315 to 1814636 12658 mRNA_4291: 12659 - Hypothetical Protein, at 1815371 to 1816823 12659 mRNA_4292: 12660 - HMMPfam-Glycosyl hydrolases family 16-PF00722,SUPERFAMILY--SSF49899, at 1817819 to 1819208 12660

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,814,457 + 12658 mRNA_4290 0.44 1.2
1,814,726 - -0.2
1,814,741 + 2.3
1,814,850 - 1.6
1,814,887 + 3.3
1,814,917 + -0.4
1,815,019 + 0.4
1,815,177 - -0.7
1,815,188 - 0.6
1,815,195 + 0.2
1,815,196 - 0.4
1,815,196 - 0.1
1,815,368 - 0.4
1,815,369 + 0.1
1,815,762 + 12659 mRNA_4291 0.27 -0.2
1,816,045 - 12659 mRNA_4291 0.46 -0.8
1,816,078 - 12659 mRNA_4291 0.49 -0.6
1,816,213 - 12659 mRNA_4291 0.58 0.0
1,816,396 + 12659 mRNA_4291 0.71 2.5
1,816,545 + 12659 mRNA_4291 0.81 -0.5
1,816,805 + 1.2
1,816,817 + -0.4
1,816,947 + -0.8
1,816,965 + 0.6
1,816,980 + 0.1
1,817,085 - -0.2
1,817,107 - 1.0
1,817,125 - 2.1
1,817,135 - 0.2
1,817,244 - -0.0
1,817,245 + 0.7
1,817,269 - 1.8
1,817,285 + -0.2
1,817,290 + 0.1
1,817,419 + -0.5
1,817,419 + 0.6
1,817,431 + -0.5
1,817,440 + -0.1
1,817,441 - 0.4
1,817,447 + 1.3
1,817,455 - 0.7
1,817,457 + 0.7
1,817,460 + 0.1
1,817,541 - 1.0
1,817,560 + -0.1
1,817,566 + 1.0
1,817,596 + 1.3
1,817,620 + 2.9
1,817,623 - -0.1
1,817,728 - 1.1