Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4202

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4201: 12569 - K02913 RP-L33, MRPL33, rpmG large subunit ribosomal protein L33, at 1596193 to 1596692 12569 mRNA_4202: 12570 - K00249 ACADM, acd acyl-CoA dehydrogenase, at 1597086 to 1599409 12570

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,596,135 + 0.4
1,596,160 - 0.9
1,596,617 + 12569 mRNA_4201 0.85 1.0
1,596,771 + -0.1
1,597,062 - 0.5
1,597,637 + 12570 mRNA_4202 0.24 -1.1
1,598,091 + 12570 mRNA_4202 0.43 0.2
1,598,150 - 12570 mRNA_4202 0.46 0.3
1,598,211 + 12570 mRNA_4202 0.48 0.3
1,598,239 + 12570 mRNA_4202 0.50 0.0
1,598,418 - 12570 mRNA_4202 0.57 0.1
1,598,689 - 12570 mRNA_4202 0.69 0.4
1,598,703 + 12570 mRNA_4202 0.70 1.5
1,598,765 + 12570 mRNA_4202 0.72 -0.9
1,599,266 - 1.1
1,599,276 - 0.7
1,599,501 + 0.2
1,599,546 - 0.0
1,599,701 - 1.5
1,599,704 - 0.3
1,599,708 - -0.5
1,599,711 + -0.5
1,599,719 + 2.0
1,599,727 - 0.4
1,599,727 + 1.1
1,599,732 - 2.6
1,599,735 - 0.6
1,599,755 + -0.7
1,599,760 + 0.1
1,599,780 - 0.4
1,599,799 + 1.4
1,599,867 - 0.1
1,599,869 + 0.1
1,599,871 - 0.2
1,599,879 + 1.0
1,599,885 + 0.7
1,599,885 - -0.3
1,599,892 - 0.1
1,599,892 - 0.6
1,599,897 + -1.2
1,599,899 + 0.7
1,599,902 - -0.6
1,599,909 + -0.3
1,599,925 - -2.4