Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4190

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4189: 12557 - Hypothetical Protein, at 1571432 to 1574972 12557 mRNA_4190: 12558 - Hypothetical Protein, at 1575041 to 1575964 12558

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,575,198 - 12558 mRNA_4190 0.17 0.2
1,575,209 - 12558 mRNA_4190 0.18 1.1
1,575,519 - 12558 mRNA_4190 0.52 1.3
1,575,650 - 12558 mRNA_4190 0.66 2.2
1,575,969 + 0.1
1,576,067 - 1.8
1,576,091 - 0.0
1,576,126 + -0.7
1,576,177 + 0.4
1,576,220 - -0.5
1,576,222 - 0.4
1,576,230 + 1.1
1,576,234 + -1.2
1,576,302 - -1.0
1,576,343 + 0.7
1,576,349 + 0.7
1,576,351 - 1.1
1,576,356 + 0.5
1,576,364 - 0.4
1,576,365 - -1.2
1,576,369 + 0.1
1,576,380 + -0.7
1,576,389 - 0.0
1,576,390 - 0.4
1,576,429 + 0.5
1,576,436 - -0.5
1,576,488 + 0.8
1,576,496 - -0.5
1,576,555 - -0.8
1,576,559 - -1.0
1,576,577 - 2.0
1,576,582 + -0.8
1,576,584 - 1.0
1,576,586 + 0.7
1,576,587 + -0.8
1,576,588 + -0.4
1,576,589 + 1.4
1,576,590 - 2.3
1,576,590 - -0.1
1,576,592 - -0.3
1,576,599 + 1.1
1,576,600 - 0.8
1,576,600 + 1.6
1,576,601 + 0.0
1,576,607 - 0.7
1,576,608 + 1.7
1,576,608 + 0.1
1,576,609 - 0.4
1,576,618 + 0.4
1,576,644 - 0.2
1,576,645 - 2.3
1,576,646 + 0.4
1,576,647 - -0.4
1,576,651 + 0.1
1,576,667 - 1.4
1,576,670 + -0.4
1,576,683 - -0.2
1,576,691 + 1.3
1,576,697 + 0.5
1,576,710 - 2.2
1,576,716 - 0.0
1,576,721 - 0.8
1,576,723 - 2.4
1,576,752 + 0.4
1,576,757 + 0.3
1,576,766 + 0.1
1,576,780 - 0.1
1,576,785 + -1.7
1,576,788 - -0.2
1,576,791 - 0.5
1,576,817 - 0.2
1,576,860 - 0.5
1,576,874 + -0.3
1,576,883 + 1.9
1,576,895 - -0.7
1,576,901 - -0.9
1,576,918 - 0.7
1,576,926 - -0.4