Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4136

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4136: 12504 - K19838 SST2 GTPase-activating protein SST2, at 1439896 to 1442005 12504

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,438,916 + 1.3
1,438,930 - 1.1
1,438,930 + -0.1
1,438,938 - 1.0
1,438,938 + 0.3
1,438,945 - 0.5
1,438,949 + 1.5
1,438,968 + -0.1
1,438,969 + -0.1
1,438,972 - -0.8
1,439,011 + -0.6
1,439,026 + 0.2
1,439,095 - 0.7
1,439,101 + -0.5
1,439,115 + 0.9
1,439,119 - 0.9
1,439,123 - 1.9
1,439,131 - -0.1
1,439,135 - 0.8
1,439,136 - -0.5
1,439,136 - -0.3
1,439,145 + -0.3
1,439,146 + 0.1
1,439,146 - 1.1
1,439,281 - 0.1
1,439,285 + -0.5
1,439,298 - -0.2
1,439,299 - 1.3
1,439,319 + 0.6
1,439,418 - -0.1
1,439,434 + -0.5
1,439,449 - 1.0
1,439,452 - -0.8
1,439,465 + -0.4
1,439,467 + 0.9
1,439,468 - -0.6
1,439,592 - -0.1
1,439,596 - 0.7
1,439,597 - -0.5
1,439,605 - 1.8
1,439,606 - 0.9
1,439,609 - -0.8
1,439,611 - 0.3
1,439,615 + -0.3
1,439,617 - 0.5
1,439,617 + -1.1
1,439,626 + 0.5
1,439,632 + -0.9
1,439,634 - -0.1
1,439,635 + 0.3
1,439,636 - 0.2
1,439,654 + -0.2
1,439,779 - -0.5
1,439,944 - -1.1
1,440,094 - 1.2
1,440,188 - 12504 mRNA_4136 0.14 -0.3
1,440,382 + 12504 mRNA_4136 0.23 0.7
1,440,535 - 12504 mRNA_4136 0.30 0.8
1,440,811 - 12504 mRNA_4136 0.43 -1.0
1,441,057 + 12504 mRNA_4136 0.55 -1.4
1,441,281 + 12504 mRNA_4136 0.66 0.7
1,441,422 - 12504 mRNA_4136 0.72 1.1
1,441,829 + 0.2
1,441,853 + 0.4
1,441,867 + -0.6
1,442,134 + 2.0
1,442,142 + -1.4
1,442,258 - 1.0
1,442,261 - 0.0
1,442,262 + 0.6
1,442,267 - 0.6
1,442,292 - 1.2
1,442,309 - 1.3
1,442,310 + 1.8
1,442,338 + 0.2
1,442,458 - -0.0
1,442,462 + -0.2
1,442,475 - -0.0
1,442,483 - -0.7
1,442,612 + 0.7
1,442,624 + -0.5
1,442,758 - -0.6
1,442,768 + -0.5
1,442,776 + -0.6
1,442,783 - 3.1
1,442,784 - 0.6
1,442,784 + -0.4
1,442,792 - 0.7
1,442,797 + 0.8
1,442,929 + 0.0
1,442,941 + 0.4
1,442,981 + -1.5