Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4036

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4035: 12403 - Hypothetical Protein, at 1207830 to 1209196 12403 mRNA_4036: 12404 - Hypothetical Protein, at 1209337 to 1209939 12404 mRNA_4037: 12405 - K12232 HECTD2 E3 ubiquitin-protein ligase HECTD2, at 1210152 to 1214937 12405

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,209,252 + 0.6
1,209,272 + -0.7
1,209,406 - 12404 mRNA_4036 0.11 -0.6
1,209,539 - 12404 mRNA_4036 0.33 2.1
1,209,695 - 12404 mRNA_4036 0.59 -1.8
1,209,806 - 12404 mRNA_4036 0.78 1.1
1,209,846 + 12404 mRNA_4036 0.84 -0.9
1,209,967 - -0.7
1,210,131 - 0.2
1,210,257 + 0.8
1,210,426 - 1.3