Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3986

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3985: 12353 - K03448 FEN2, LIZ1 MFS transporter, ACS family, pantothenate transporter, at 1076249 to 1078580 12353 mRNA_3986: 12354 - K01439 dapE succinyl-diaminopimelate desuccinylase, at 1078866 to 1080824 12354

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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1,078,703 + 0.6
1,078,721 + 2.0
1,078,721 - 1.5
1,078,739 + 0.8
1,078,744 + -0.3
1,078,748 + -0.6
1,078,846 - 2.9
1,078,854 - 2.2
1,078,856 + 1.3
1,078,878 - 0.1
1,078,883 - 1.2
1,078,897 + -0.7
1,078,911 - 1.4
1,078,914 + -0.4
1,078,915 - 1.9
1,079,090 + 12354 mRNA_3986 0.11 -0.1
1,079,323 + 12354 mRNA_3986 0.23 0.2
1,079,749 + 12354 mRNA_3986 0.45 0.4
1,080,257 + 12354 mRNA_3986 0.71 1.3
1,080,331 + 12354 mRNA_3986 0.75 0.8
1,080,454 - 12354 mRNA_3986 0.81 -1.2
1,080,727 + -1.0
1,081,506 - 1.2
1,081,512 + 0.2
1,081,516 + 0.7
1,081,517 + -0.3
1,081,523 + 1.5
1,081,813 + -0.1
1,081,814 + 1.1
1,081,819 + 0.5