Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3903

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3902: 12270 - K12471 EPN epsin, at 855134 to 857273 12270 mRNA_3903: 12271 - K01273 DPEP membrane dipeptidase, at 857570 to 859111 12271 mRNA_3904: 12272 - KOG1176 Acyl-CoA synthetase, at 859161 to 861426 12272

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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856,578 + 12270 mRNA_3902 0.67 0.5
857,355 - 1.1
857,490 + 1.2
857,506 - 0.5
857,514 - 0.1
857,527 + -0.2
857,536 + 0.9
857,697 + 0.1
857,787 - 12271 mRNA_3903 0.14 0.6
857,820 + 12271 mRNA_3903 0.16 -0.4
857,840 + 12271 mRNA_3903 0.18 -0.5
857,861 + 12271 mRNA_3903 0.19 0.1
858,266 - 12271 mRNA_3903 0.45 0.8
858,291 + 12271 mRNA_3903 0.47 1.7
858,294 - 12271 mRNA_3903 0.47 2.3
858,744 + 12271 mRNA_3903 0.76 -1.2
858,795 + 12271 mRNA_3903 0.79 -0.7
859,010 + 1.2
859,262 - -0.7
859,540 - 12272 mRNA_3904 0.17 0.6
859,617 + 12272 mRNA_3904 0.20 -1.3
859,736 - 12272 mRNA_3904 0.25 1.2
859,751 - 12272 mRNA_3904 0.26 -0.4
859,759 + 12272 mRNA_3904 0.26 0.7
860,077 - 12272 mRNA_3904 0.40 -0.7