Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3901

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3900: 12268 - SUPERFAMILY--SSF55729, at 850598 to 851508 12268 mRNA_3901: 12269 - K00863 DAK, TKFC triose/dihydroxyacetone kinase / FAD-AMP lyase (cyclizing), at 852096 to 854470 12269 mRNA_3902: 12270 - K12471 EPN epsin, at 855134 to 857273 12270

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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851,382 + 12268 mRNA_3900 0.86 -0.3
851,620 - 0.9
851,865 + 0.0
851,873 - -1.0
851,927 - 0.5
852,069 + 1.1
852,171 - 0.3
852,639 + 12269 mRNA_3901 0.23 -1.0
853,339 - 12269 mRNA_3901 0.52 0.6
853,389 + 12269 mRNA_3901 0.54 0.2
853,635 - 12269 mRNA_3901 0.65 -0.5
853,661 - 12269 mRNA_3901 0.66 -0.2
853,779 - 12269 mRNA_3901 0.71 2.3
853,906 + 12269 mRNA_3901 0.76 0.2
854,074 - 12269 mRNA_3901 0.83 -0.0
854,091 - 12269 mRNA_3901 0.84 1.1
854,324 + -0.4
854,389 + -0.5
854,496 - 1.0
854,501 + 3.4
854,512 - -0.6
854,516 - 0.6
854,519 + -0.6
854,526 - -1.0
854,527 + -0.2
854,531 + 0.4
854,663 + 0.8
854,663 - -1.4
854,665 - 0.7
854,665 - -0.6
854,667 - -0.4
854,668 + -0.4
854,668 + 0.3
854,670 + -0.3
854,675 - -0.2
854,675 + 0.2
854,675 - 1.3
854,676 + 0.3
854,676 + 0.5
854,677 + 1.4
854,679 + -0.6
854,692 - -0.2
854,695 - 0.1
854,743 - -0.9
854,762 + -0.2
854,765 - -0.1
854,770 - 0.1
854,775 + 0.1
854,786 + 0.2
854,891 - -0.1
854,908 + -1.4
854,916 + 0.3
854,925 - -0.6
854,927 - 0.1
855,054 - 0.2
855,071 + 1.4