Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3878

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3878: 12246 - K07975 K07975 Rho family, other, at 809804 to 811045 12246 mRNA_3879: 12247 - Interpro Selenoprotein SelK_SelG, at 811174 to 811650 12247

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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809,186 - 0.1
809,194 + -1.1
809,208 - 1.2
809,215 + 1.5
809,232 + -2.1
809,355 - -0.8
809,355 - 1.3
809,387 - 1.1
809,404 + -1.0
809,511 + -0.0
809,517 - 1.2
809,519 - 1.8
809,527 - -0.1
809,529 - 0.0
809,531 - 0.0
809,535 + 0.2
809,546 - 0.8
809,548 + 2.0
809,548 + 0.2
809,556 + -0.0
809,585 - -0.3
809,586 + 0.6
809,596 - -0.3
809,726 + 0.3
809,729 + 1.2
809,856 + 0.8
809,867 + -2.9
810,010 - 12246 mRNA_3878 0.17 0.0
810,235 - 12246 mRNA_3878 0.35 1.0
810,299 - 12246 mRNA_3878 0.40 -0.5
810,422 + 12246 mRNA_3878 0.50 -0.2
810,493 - 12246 mRNA_3878 0.55 0.8
810,735 + 12246 mRNA_3878 0.75 2.3
810,811 - 12246 mRNA_3878 0.81 1.4
811,149 - 0.4
811,152 - 2.8
811,153 + 0.2
811,159 - 2.0
811,171 - -1.2
811,171 - 0.1
811,171 - 0.3
811,176 + 0.2
811,179 - -0.2
811,180 - 0.4
811,180 + 0.1
811,181 + 0.5
811,181 + 0.6
811,185 + 1.3
811,271 + 12247 mRNA_3879 0.20 1.5
811,297 - 12247 mRNA_3879 0.26 -0.6
811,303 - 12247 mRNA_3879 0.27 0.4
811,593 - 12247 mRNA_3879 0.88 -1.9
811,603 - 0.2
811,625 + 0.1