Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3842

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3841: 12209 - K13431 SRPR signal recognition particle receptor subunit alpha, at 716088 to 718591 12209 mRNA_3842: 12210 - K18179 COA6 cytochrome c oxidase assembly factor 6, at 718852 to 719357 12210 mRNA_3843: 12211 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 719514 to 723213 12211

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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718,086 - 12209 mRNA_3841 0.80 -1.5
718,092 - 12209 mRNA_3841 0.80 -1.2
718,527 - -0.6
718,789 - -0.0
718,822 + 0.0
718,847 + 1.5
718,929 + 12210 mRNA_3842 0.15 0.8
718,962 - 12210 mRNA_3842 0.22 0.8
718,970 + 12210 mRNA_3842 0.23 0.5
718,998 - 12210 mRNA_3842 0.29 1.1
719,110 - 12210 mRNA_3842 0.51 1.3
719,119 + 12210 mRNA_3842 0.53 0.4
719,136 + 12210 mRNA_3842 0.56 0.0
719,272 - 12210 mRNA_3842 0.83 1.0
719,318 + -0.1
719,396 - 2.1
719,569 - 1.3
719,590 - 1.3
720,019 - 12211 mRNA_3843 0.14 1.0