Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3835

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3834: 12202 - Hypothetical Protein, at 695407 to 697402 12202 mRNA_3835: 12203 - K09260 MEF2A MADS-box transcription enhancer factor 2A, at 697638 to 699790 12203

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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696,776 + 12202 mRNA_3834 0.69 0.6
696,817 - 12202 mRNA_3834 0.71 -1.3
697,664 - 0.5
698,500 + 12203 mRNA_3835 0.40 0.2
698,672 + 12203 mRNA_3835 0.48 0.0
699,110 - 12203 mRNA_3835 0.68 1.4
699,250 - 12203 mRNA_3835 0.75 0.5
699,529 - 12203 mRNA_3835 0.88 0.5
699,532 - 12203 mRNA_3835 0.88 -0.2
699,810 + -1.5
699,969 - 0.0
699,991 + -0.2
700,118 - 1.1
700,143 - -1.5
700,283 - 0.2
700,426 - 0.5
700,428 - 1.1
700,472 - 0.8
700,524 - 0.8
700,530 - -0.1
700,538 + -0.1
700,553 - 1.0
700,553 + 2.6
700,607 + -0.1
700,621 + 0.6
700,630 - 0.7
700,681 - 0.3
700,779 + 0.2