Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3664

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3663: 12031 - K01738 cysK cysteine synthase A, at 288181 to 289942 12031 mRNA_3664: 12032 - K15111 SLC25A26 solute carrier family 25 (mitochondrial S-adenosylmethionine transporter), member 26, at 290844 to 292094 12032 mRNA_3665: 12033 - HMMPfam-CorA-like Mg2+ transporter protein-PF01544,SUPERFAMILY--SSF143865,SUPERFAMILY--SSF144083, at 292200 to 295663 12033

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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289,849 - -2.8
289,859 + -1.0
289,860 + -1.9
290,013 + 0.9
290,018 + 0.1
290,028 - 0.4
290,166 - 1.0
290,293 + 2.8
290,589 + -1.1
290,613 - 0.0
290,869 - -2.7
290,880 + -3.0
290,881 + -2.3
290,923 - -4.2
291,888 - 12032 mRNA_3664 0.83 -2.1
292,165 - -0.3
292,166 + -0.0
292,187 - 0.3
292,192 - -1.0
292,324 + 0.3
292,326 - -1.3
292,451 - 1.0
292,488 + 1.8
292,612 - 12033 mRNA_3665 0.12 -0.3
292,756 + 12033 mRNA_3665 0.16 0.4
292,888 + 12033 mRNA_3665 0.20 -0.0
292,932 + 12033 mRNA_3665 0.21 0.0
293,056 - 12033 mRNA_3665 0.25 -1.1