Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3635

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3634: 12002 - KOG2456 Aldehyde dehydrogenase, at 213705 to 215567 12002 mRNA_3635: 12003 - BLAST similar to An07g01410 [Aspergillus kawachii IFO 4308], at 215730 to 216270 12003 mRNA_3636: 12004 - K03238 EIF2S2 translation initiation factor 2 subunit 2, at 217154 to 218587 12004

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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215,042 - 12002 mRNA_3634 0.72 -2.4
215,330 - 12002 mRNA_3634 0.87 -1.1
215,507 - 1.5
215,627 - 2.7
215,638 + -0.0
215,663 - 0.1
215,672 + 0.2
215,952 + 12003 mRNA_3635 0.41 -0.3
216,212 + 12003 mRNA_3635 0.89 0.1
216,392 - 2.0
216,401 + -0.1
216,412 - -0.1
216,539 - -0.6
216,541 - 1.4
216,546 + -1.0
216,567 + 0.7