Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3562

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3562: 11930 - KOG0017 FOG Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations, at 59099 to 59542 11930

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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58,154 + 0.6
58,311 - -0.2
58,643 + -0.2
58,780 - 2.7
58,870 + 0.5
58,911 - 0.3
58,917 + 0.7
59,096 + 1.8
59,424 - 11930 mRNA_3562 0.73 0.3
59,522 - 1.3
59,824 - 0.3
59,825 + 1.3
59,956 + -1.1
59,957 - 1.1
60,097 + 1.9
60,098 - 1.0
60,117 + -1.4
60,254 + -0.2
60,260 - 0.2
60,270 + 1.3
60,306 + -0.3
60,394 + 2.5
60,399 + -0.3
60,406 - 1.4
60,413 + -1.1
60,424 + -0.2
60,437 - -0.0