Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3537

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3537: 11905 - Hypothetical Protein, at 102 to 917 11905

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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2 + 0.6
2 + 0.8
2 + 2.4
2 + -0.4
2 + -0.1
2 + 0.2
2 + -0.1
14 + -0.0
26 + 0.1
36 + -1.0
39 + 0.3
42 - 0.4
50 + 0.6
50 + -0.1
50 + -1.0
53 - 1.0
57 + 0.6
59 - 1.3
103 + -0.5
104 + 0.7
112 + 0.2
117 - -0.0
120 - -1.3
140 - -0.2
141 + 0.1
146 + 1.6
150 + -0.3
199 - 11905 mRNA_3537 0.12 0.6
200 + 11905 mRNA_3537 0.12 -0.1
200 - 11905 mRNA_3537 0.12 0.1
200 - 11905 mRNA_3537 0.12 -0.5
200 - 11905 mRNA_3537 0.12 -1.2
201 - 11905 mRNA_3537 0.12 0.7
207 + 11905 mRNA_3537 0.13 -0.0
207 + 11905 mRNA_3537 0.13 -0.0
207 + 11905 mRNA_3537 0.13 -0.6
209 + 11905 mRNA_3537 0.13 0.5
210 + 11905 mRNA_3537 0.13 0.3
213 + 11905 mRNA_3537 0.14 -0.2
213 + 11905 mRNA_3537 0.14 1.8
214 + 11905 mRNA_3537 0.14 0.2
214 + 11905 mRNA_3537 0.14 0.0
218 + 11905 mRNA_3537 0.14 0.2
221 + 11905 mRNA_3537 0.15 0.2
222 + 11905 mRNA_3537 0.15 0.3
222 + 11905 mRNA_3537 0.15 0.1
222 + 11905 mRNA_3537 0.15 -0.2
223 - 11905 mRNA_3537 0.15 0.1
225 - 11905 mRNA_3537 0.15 -1.1
227 - 11905 mRNA_3537 0.15 -0.6
227 + 11905 mRNA_3537 0.15 0.7
230 + 11905 mRNA_3537 0.16 1.0
230 + 11905 mRNA_3537 0.16 0.8
246 - 11905 mRNA_3537 0.18 0.5
246 - 11905 mRNA_3537 0.18 -1.4
251 + 11905 mRNA_3537 0.18 0.7
252 + 11905 mRNA_3537 0.18 -0.5
260 + 11905 mRNA_3537 0.19 0.3
262 + 11905 mRNA_3537 0.20 -0.1
265 - 11905 mRNA_3537 0.20 0.1
272 - 11905 mRNA_3537 0.21 0.1
274 + 11905 mRNA_3537 0.21 -1.1
325 - 11905 mRNA_3537 0.27 1.0
326 - 11905 mRNA_3537 0.27 0.6
341 + 11905 mRNA_3537 0.29 0.9
359 + 11905 mRNA_3537 0.31 0.3
362 + 11905 mRNA_3537 0.32 0.9
367 - 11905 mRNA_3537 0.32 0.5
368 + 11905 mRNA_3537 0.33 0.5
368 + 11905 mRNA_3537 0.33 -0.0
368 + 11905 mRNA_3537 0.33 -0.2
373 + 11905 mRNA_3537 0.33 2.8
373 - 11905 mRNA_3537 0.33 0.2
373 - 11905 mRNA_3537 0.33 -0.2
379 + 11905 mRNA_3537 0.34 0.0
380 + 11905 mRNA_3537 0.34 -0.4
417 + 11905 mRNA_3537 0.39 1.2
452 + 11905 mRNA_3537 0.43 1.1
472 + 11905 mRNA_3537 0.45 1.5
484 + 11905 mRNA_3537 0.47 0.3
489 - 11905 mRNA_3537 0.47 0.6
503 - 11905 mRNA_3537 0.49 -1.0
511 + 11905 mRNA_3537 0.50 1.4
518 + 11905 mRNA_3537 0.51 2.5
523 + 11905 mRNA_3537 0.52 -0.5
533 + 11905 mRNA_3537 0.53 -0.2
539 + 11905 mRNA_3537 0.54 -0.1
550 + 11905 mRNA_3537 0.55 0.2
579 + 11905 mRNA_3537 0.58 0.3
638 - 11905 mRNA_3537 0.66 2.1
640 - 11905 mRNA_3537 0.66 -1.6
657 + 11905 mRNA_3537 0.68 0.1
762 - 11905 mRNA_3537 0.81 -0.2
768 + 11905 mRNA_3537 0.82 -1.4
791 - 11905 mRNA_3537 0.84 -0.4
801 + 11905 mRNA_3537 0.86 1.1
804 + 11905 mRNA_3537 0.86 -0.1
822 + 11905 mRNA_3537 0.88 -0.2
827 + 11905 mRNA_3537 0.89 -0.2
842 + -0.3
842 + -0.5
845 - 1.1
962 - -0.0
990 + -1.6
1,074 + 2.2
1,080 - -0.7
1,107 + 0.1
1,110 - -0.6
1,123 + 0.4
1,143 + -0.6
1,256 - 0.2
1,278 + 0.0
1,336 + 0.1
1,371 - 0.1
1,404 - -0.1
1,429 + 0.5
1,450 + 0.4
1,528 + -1.2
1,550 + 1.1
1,647 - -0.1
1,653 + -0.9
1,661 - 0.8
1,663 + 1.1
1,719 + 0.3
1,720 + 0.3
1,760 + 0.1
1,814 - 0.1
1,902 - 1.5