Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3511

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3511: 11879 - K10875 RAD54L, RAD54 DNA repair and recombination protein RAD54 and RAD54-like protein, at 270571 to 274030 11879 mRNA_3512: 11880 - K10873 RAD52 DNA repair and recombination protein RAD52, at 274074 to 276108 11880

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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269,714 + -1.1
269,996 - 0.8
270,157 + 0.9
270,157 - 1.2
270,281 - 0.8
270,287 + -0.5
270,296 - 0.1
270,296 + 0.5
270,436 - -0.1
270,460 + 1.9
270,786 + -0.5
271,162 - 11879 mRNA_3511 0.17 -1.9
271,351 - 11879 mRNA_3511 0.23 0.5
273,945 + 0.1
274,402 + 11880 mRNA_3512 0.16 1.8
274,438 + 11880 mRNA_3512 0.18 1.4
274,546 - 11880 mRNA_3512 0.23 -0.1
274,660 + 11880 mRNA_3512 0.29 1.1
274,660 - 11880 mRNA_3512 0.29 0.4
274,697 + 11880 mRNA_3512 0.31 0.6
274,699 - 11880 mRNA_3512 0.31 1.3
274,706 - 11880 mRNA_3512 0.31 -0.3
274,827 - 11880 mRNA_3512 0.37 -0.0
274,827 - 11880 mRNA_3512 0.37 0.1
274,854 + 11880 mRNA_3512 0.38 -0.6